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Published online ahead of print on 4 November 2009 as doi:10.1099/vir.0.016436-0
J Gen Virol (2009), DOI 10.1099/vir.0.016436-0
© 2009 Society for General Microbiology

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A history estimate and evolutionary analysis of rabies virus variants in China

Pinggang Ming1,4, Jiaxin Yan1, Simon Rayner2, Shengli Meng1, Gelin Xu1, Qing Tang3, Jie Wu1, Jing Luo1 and Xiaoming Yang1

1 Wuhan Institute of Biological Products;
2 Wuhan Institute of Virology, Chinese Academy of Sciences;
3 National Institute for Viral Disease Control and Prevention, China CDC

4 E-mail: pgming2002{at}sina.com

To investigate the evolutionary dynamics of RABV in China, we collected and sequenced 55 isolates sampled from 14 provinces of China over the last 40 years and performed a coalescent-based analysis of the G gene. This revealed that RABV currently circulating in China comprised three main groups. Bayesian coalescent analysis estimated the date of the most recent common ancestor for the current RABV Chinese strains to be 1412 (with a 95% confidence interval of 1006-1736). The estimated mean substitution rate for the G gene sequences (3.961x10-4 substitutions per site, per year) was in accordance with previous reports for RABV.

Received 7 September 2009; accepted 2 November 2009.





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